Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0983Hypothetical protein. (340 aa)    
Predicted Functional Partners:
RN08_0984
ferredoxin/ferredoxin--NADP reductase.
 
 
 0.977
RN08_0982
Phosphoserine aminotransferase.
     
 0.901
RN08_3062
Oxidoreductase.
  
 0.751
RN08_3567
stearoyl-CoA 9-desaturase electron transfer partner.
  
 0.751
RN08_3930
Electron transfer protein FdxB.
  
 0.751
RN08_3948
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
  
 0.751
RN08_3585
TetR family transcriptional regulator.
  
     0.729
RN08_1641
Hypothetical protein.
  
 
 0.703
RN08_0517
Hypothetical protein.
  
   
 0.670
RN08_0981
Hypothetical protein.
       0.642
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.