STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1141Nucleoside triphosphate pyrophosphohydrolase. (326 aa)    
Predicted Functional Partners:
RN08_2713
Nucleoside diphosphate kinase.
     
  0.991
RN08_3997
Hypoxanthine-guanine phosphoribosyltransferase.
 
  
  0.922
RN08_3040
Thymidylate synthase ThyX.
    
 0.919
RN08_1500
Non-canonical purine NTP pyrophosphatase.
 
  
 0.917
RN08_3764
Inosine-5'-monophosphate dehydrogenase.
    
 0.907
RN08_3747
GMP synthase.
    
  0.904
RN08_2048
Inosine-5'-monophosphate dehydrogenase.
    
 0.900
RN08_3763
Oxidoreductase.
    
 0.900
RN08_3049
Thymidylate synthase ThyA.
   
 
 0.896
RN08_1138
Transcriptional regulator.
     
 0.885
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.