STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1213Mycothiol S-conjugate amidase. (288 aa)    
Predicted Functional Partners:
RN08_2361
cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase.
 
 
 0.952
RN08_0540
D-inositol 3-phosphate glycosyltransferase.
 
 
 0.893
RN08_0915
Mycothiol acetyltransferase.
 
   
 0.885
RN08_1215
Hypothetical protein.
       0.874
RN08_1214
Hypothetical protein.
       0.872
RN08_2732
Hypothetical protein.
 
    0.785
RN08_1212
Membrane protein.
       0.775
RN08_0405
Hypothetical protein.
  
     0.748
RN08_2532
Hypothetical protein.
  
     0.717
RN08_3528
Glutaredoxin protein.
  
   
 0.645
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.