close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1347Hypothetical protein. (562 aa)    
Predicted Functional Partners:
RN08_1346
Hypothetical protein.
     0.990
RN08_1348
Hypothetical protein.
       0.776
RN08_1349
fatty-acid--CoA ligase FadD6.
       0.731
RN08_1427
Lipoprotein LprB.
  
 
   0.690
RN08_1353
DNA-3-methyladenine glycosylase I TagA.
       0.614
RN08_1350
Dihydropteroate synthase.
       0.604
RN08_4241
Transmembrane protein.
  
     0.596
RN08_1428
Lipoprotein LprC.
  
 
   0.572
RN08_1352
divIVA domain protein.
       0.568
RN08_1351
Glucosyl-3-phosphoglycerate synthase.
       0.563
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.