STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1539Glycolipid sulfotransferase; Overlaps another CDS with the same product name. (155 aa)    
Predicted Functional Partners:
RN08_1538
Glycolipid sulfotransferase; Overlaps another CDS with the same product name.
     0.974
RN08_1536
Membrane protein.
   
 
 0.885
RN08_1537
Alpha-pyrone synthesis polyketide synthase-like protein.
     
 0.818
RN08_1742
Fumarate reductase membrane anchor subunit; Overlaps another CDS with the same product name.
      
 0.650
RN08_1741
Fumarate reductase iron-sulfur subunit.
      
 0.622
RN08_0386
Isoniazid inducible protein IniB.
  
  
 0.529
RN08_3020
Hypothetical protein.
  
     0.498
RN08_0346
PPE family protein PPE5.
  
 
   0.497
RN08_3934
PPE family protein PPE64.
  
 
   0.495
RN08_0348
PPE family protein PPE6.
  
 
   0.492
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.