STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1582Bifunctional riboflavin biosynthesis GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase. (425 aa)    
Predicted Functional Partners:
RN08_1576
Bifunctional riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase.
 0.999
RN08_1579
Riboflavin synthase.
 0.999
RN08_1583
6,7-dimethyl-8-ribityllumazine synthase.
 
 
 0.999
RN08_2955
Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase.
  
 0.967
RN08_2156
Riboflavin biosynthesis protein RibA.
 
  
0.960
RN08_3988
GTP cyclohydrolase I.
 
 
 0.948
RN08_3073
Bifunctional riboflavin kinase /FMN adenylyltransferase.
    
 0.913
RN08_2713
Nucleoside diphosphate kinase.
  
 0.907
RN08_0965
Molybdenum cofactor biosynthesis protein MoaA.
    
 0.906
RN08_3425
Cyclic pyranopterin monophosphate synthase 1.
  
 
  0.904
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.