STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1771Hypothetical protein. (136 aa)    
Predicted Functional Partners:
RN08_0755
Transmembrane transport protein MmpL5.
  
     0.728
RN08_1746
Transmembrane transport protein MmpL6.
  
     0.718
RN08_2594
Transmembrane transport protein MmpL9.
  
     0.712
RN08_0332
ESX-3 secretion system protein EccD.
  
     0.708
RN08_0567
Transmembrane transport protein MmpL2.
  
     0.708
RN08_0453
Transmembrane transport protein MmpL1.
  
     0.706
RN08_0502
Transmembrane transport protein MmpL4.
  
     0.702
RN08_0325
ESX-3 secretion system protein EccB3.
  
     0.689
RN08_1773
Histidinol-phosphate aminotransferase.
       0.662
RN08_1774
Imidazole glycerol-phosphate dehydratase.
       0.662
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.