STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1798Adenylyl cyclase. (623 aa)    
Predicted Functional Partners:
RN08_2863
Bifunctional (p)ppGpp synthase/hydrolase RelA; Overlaps another CDS with the same product name.
  
  
  0.911
RN08_0897
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA.
     
 0.910
RN08_1790
Pyruvate kinase.
    
 0.907
RN08_2713
Nucleoside diphosphate kinase.
    
 0.905
RN08_1582
Bifunctional riboflavin biosynthesis GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
  0.801
RN08_2156
Riboflavin biosynthesis protein RibA.
    
  0.801
RN08_3988
GTP cyclohydrolase I.
     
  0.800
RN08_2455
Adenylyl cyclase.
  
   
 0.710
RN08_4052
cAMP receptor protein.
 
 0.654
RN08_0965
Molybdenum cofactor biosynthesis protein MoaA.
   
  0.641
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.