STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1952Sulfite oxidase. (271 aa)    
Predicted Functional Partners:
RN08_1953
Sulfite oxidase.
     0.976
RN08_2652
Sulfite reductase; Overlaps another CDS with the same product name.
   
 
 0.925
RN08_1439
Bifunctional sulfate adenyltransferase subunit 1 CysN/adenylylsulfate kinase CysC.
     
 0.921
RN08_2536
Thiosulfate sulfurtransferase SseB.
    
 0.912
RN08_0911
Thiosulfate sulfurtransferase.
    
 0.911
RN08_3622
Thiosulfate sulfurtransferase SseA.
    
 0.908
RN08_1438
Sulfate adenylyltransferase subunit 2.
     
 0.906
RN08_2654
Phosphoadenosine phosphosulfate reductase.
     
 0.906
RN08_2660
Sulfate ABC transporter ATP-binding protein CysA.
    
 0.903
RN08_2661
Sulfate ABC transporter permease CysW.
     
 0.903
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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