STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN08_1998ESX-5 type VII secretion system protein EccE. (406 aa)    
Predicted Functional Partners:
RN08_1995
ESX-5 type VII secretion system protein EccD.
  
 
 0.967
RN08_1997
Membrane-anchored mycosin MycP.
  
  
 0.925
RN08_1999
ESX-5 type VII secretion system protein EccA.
  
  
 0.886
RN08_1996
Membrane-anchored mycosin MycP.
  
  
 0.797
RN08_1984
ESX-5 type VII secretion system protein EccC5.
    
 
 0.780
RN08_1983
ESX-5 type VII secretion system protein EccB5.
   
 
 0.730
RN08_0200
Mce associated transmembrane protein.
   
    0.713
RN08_4200
Decaprenyl-phosphate phosphoribosyltransferase.
   
    0.713
RN08_2832
Membrane protein.
   
    0.693
RN08_1452
Transcription termination factor Rho.
   
    0.646
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.