STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2015Dehydrogenase; Overlaps another CDS with the same product name. (149 aa)    
Predicted Functional Partners:
RN08_2016
Dehydrogenase; Overlaps another CDS with the same product name.
     0.994
RN08_2434
Ubiquinol-cytochrome C reductase rieske iron-sulfur subunit; Overlaps another CDS with the same product name.
  
 
 0.545
RN08_2435
Ubiquinol-cytochrome C reductase rieske iron-sulfur subunit; Overlaps another CDS with the same product name.
  
 
 0.545
RN08_2432
Cytochrome C oxidase subunit III.
  
 
 0.505
RN08_4276
ESX-1 secretion system protein EccE1.
  
     0.494
RN08_4270
ESX-1 secretion system protein EccD1; Overlaps another CDS with the same product name.
  
     0.493
RN08_4263
Glutamate synthase large subunit.
     
 0.491
RN08_1795
Cytochrome D ubiquinol oxidase subunit II CydB.
    
 0.487
RN08_2440
Cytochrome C oxidase subunit II.
  
 
 0.485
RN08_2436
Ubiquinol-cytochrome C reductase cytochrome subunit B.
   
 
 0.483
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.