Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_2018Membrane-bound C-5 sterol desaturase. (314 aa)    
Predicted Functional Partners:
RN08_3748
Phytoene synthase.
  
 
 0.795
RN08_3725
Type B diterpene cyclase.
   
 
 0.790
RN08_3930
Electron transfer protein FdxB.
 
 
 0.743
RN08_2019
Hypothetical protein.
       0.714
RN08_3588
Transmembrane alkane 1-monooxygenase AlkB.
 
 
 0.677
RN08_3566
stearoyl-CoA 9-desaturase.
 
 
 0.617
RN08_0647
Oxidoreductase.
   
 
 0.603
RN08_1409
Oxidoreductase.
   
 
 0.603
RN08_1945
Oxidoreductase.
   
 
 0.603
RN08_2153
Oxygenase.
   
 
 0.603
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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