STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2072Hypothetical protein. (486 aa)    
Predicted Functional Partners:
RN08_0956
Fatty oxidation protein FadB.
  
 0.996
RN08_0521
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.981
RN08_1905
3-hydroxybutyryl-CoA dehydrogenase FadB.
  
 0.981
RN08_0459
Phosphate acetyltransferase.
    
 0.964
RN08_4043
acetyl-CoAsynthetase.
  
 
 0.959
RN08_2721
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.958
RN08_2774
succinyl-CoA:3-ketoacid-CoA transferase subunit B.
  
 
 0.949
RN08_2775
succinyl-CoA:3-ketoacid-CoA transferase subunit A.
  
 
 0.947
RN08_2720
2-oxoglutarate oxidoreductase subunit KorB.
     
 0.937
RN08_0840
Methylmalonate-semialdehyde dehydrogenase.
   
 0.936
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.