STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2092Diacylglycerol acyltransferase/mycolyltransferase Ag85B. (310 aa)    
Predicted Functional Partners:
RN08_4199
Terminal beta-(1->2)-arabinofuranosyltransferase.
 
  
  0.980
RN08_0149
Diacylglycerol acyltransferase/mycolyltransferase Ag85C.
  
  
0.949
RN08_2091
Chorismate mutase.
  
  
 0.923
RN08_3412
Triacylglycerol lipase Lip.
    
 0.903
RN08_4198
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
  
 
0.901
RN08_2501
Diacylglycerol kinase.
     
  0.900
RN08_4196
Membrane protein.
 
     0.812
RN08_2187
Immunogenic protein Mpt64.
      
 0.792
RN08_2250
Alpha-crystallin.
      
 0.779
RN08_1056
Hypothetical protein.
   
    0.768
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.