Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_2188Ribonucleoside-diphosphate reductase subunit beta NrdF1. (322 aa)    
Predicted Functional Partners:
RN08_3362
Ribonucleoside-diphosphate reductase subunit alpha.
 
 0.998
RN08_0636
Vitamin B12-dependent ribonucleoside-diphosphate reductase; Overlaps another CDS with the same product name.
  
 0.991
RN08_3363
NrdI protein.
 
 
 0.985
RN08_1902
Cytidylate kinase.
    
 0.959
RN08_0814
Adenylate kinase.
     
 0.958
RN08_1555
Guanylate kinase.
   
 
 0.957
RN08_2713
Nucleoside diphosphate kinase.
     
 0.957
RN08_3583
Thymidylate kinase.
  
 
 0.924
RN08_0637
Vitamin B12-dependent ribonucleoside-diphosphate reductase; Overlaps another CDS with the same product name.
  
 0.916
RN08_0264
Ribonucleoside-diphosphate reductase subunit beta NrdB.
     
 0.912
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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