STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2285Cobalamin biosynthesis protein CobN. (1194 aa)    
Predicted Functional Partners:
RN08_3139
Cobyrinic acid A,C-diamide synthase.
 
 
 0.996
RN08_3140
cob(I)alamin adenosyltransferase.
 
  
 0.991
RN08_3141
Magnesium chelatase; Overlaps another CDS with the same product name.
 
 0.977
RN08_3142
Magnesium chelatase; Overlaps another CDS with the same product name.
 
 0.976
RN08_2297
precorrin-6Y C(5,15)-methyltransferase; Overlaps another CDS with the same product name.
 
  
 0.965
RN08_1471
cob(I)yrinic acid a,c-diamide adenosyltransferase.
    
 0.935
RN08_2291
Bifunctional S-adenosyl-L-methionine-precorrin-2 methyl transferase/precorrin-3 methylase.
 
 
 0.915
RN08_2295
precorrin-6A reductase.
 
   
 0.913
RN08_2290
Bifunctional S-adenosyl-L-methionine-precorrin-2 methyl transferase/precorrin-3 methylase.
 
 
 0.912
RN08_2296
Precorrin-4 C(11)-methyltransferase.
 
   
 0.851
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.