STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2361cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase. (414 aa)    
Predicted Functional Partners:
RN08_0915
Mycothiol acetyltransferase.
 
  
 0.990
RN08_1314
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase.
 
 
 0.986
RN08_1213
Mycothiol S-conjugate amidase.
 
 
 0.952
RN08_2590
Serine acetyltransferase.
 
 
 0.899
RN08_2360
Oxidoreductase.
       0.840
RN08_0540
D-inositol 3-phosphate glycosyltransferase.
  
   
 0.835
RN08_1556
DNA-directed RNA polymerase subunit omega.
  
  
 0.827
RN08_3803
Phosphoglucosamine mutase.
 
   
 0.817
RN08_2362
3'-phosphoadenosine 5'-phosphate phosphatase.
     
 0.810
RN08_1351
Glucosyl-3-phosphoglycerate synthase.
      
 0.790
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.