Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_2467Glutamate-ammonia-ligase adenylyltransferase. (994 aa)    
Predicted Functional Partners:
RN08_2468
Glutamine synthetase.
  
  
 0.898
RN08_4263
Glutamate synthase large subunit.
    
 0.875
RN08_2466
Glutamine synthetase.
 
  
 0.801
RN08_3214
Bifunctional uridylyltransferase/uridylyl-removing enzyme.
 
   
 0.766
RN08_2469
Carboxylesterase B.
     
 0.704
RN08_2271
RNA polymerase-binding protein RbpA.
  
     0.697
RN08_2966
Alanine-rich protein.
  
     0.669
RN08_2470
Carboxylesterase A.
     
 0.667
RN08_0005
DNA gyrase subunit B.
      
 0.663
RN08_3215
Nitrogen regulatory protein P-II.
 
 
 
 0.656
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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