STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2467Glutamate-ammonia-ligase adenylyltransferase. (994 aa)    
Predicted Functional Partners:
RN08_2468
Glutamine synthetase.
  
  
 0.937
RN08_2466
Glutamine synthetase.
 
  
 0.912
RN08_4263
Glutamate synthase large subunit.
    
 0.905
RN08_2469
Carboxylesterase B.
     
 0.739
RN08_3214
Bifunctional uridylyltransferase/uridylyl-removing enzyme.
 
   
 0.735
RN08_3215
Nitrogen regulatory protein P-II.
 
 
 
 0.710
RN08_2470
Carboxylesterase A.
     
 0.699
RN08_2271
RNA polymerase-binding protein RbpA.
  
     0.697
RN08_2966
Alanine-rich protein.
  
     0.669
RN08_2035
HTH-type transcriptional regulator.
  
     0.630
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.