STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_270850S ribosomal protein L27. (86 aa)    
Predicted Functional Partners:
RN08_0062
30S ribosomal protein S6.
  
 
 0.999
RN08_0559
Hypothetical protein.
    
   0.999
RN08_0788
50S ribosomal protein L16.
 
 
 0.999
RN08_0800
50S ribosomal protein L18.
   
 
 0.999
RN08_2709
50S ribosomal protein L21.
 
 0.999
RN08_3805
50S ribosomal protein L13.
 
 
 0.999
RN08_0781
50S ribosomal protein L3.
 
 
 0.998
RN08_1819
50S ribosomal protein L20.
 
 
 0.998
RN08_3199
50S ribosomal protein L19.
 
 
 0.998
RN08_3804
30S ribosomal protein S9.
 
 
 0.998
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.