STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2774succinyl-CoA:3-ketoacid-CoA transferase subunit B. (218 aa)    
Predicted Functional Partners:
RN08_2775
succinyl-CoA:3-ketoacid-CoA transferase subunit A.
 0.999
RN08_1482
acetyl-CoA acetyltransferase.
  
 
 0.972
RN08_0955
Acyltransferase.
  
 
 0.967
RN08_1206
Beta-ketoacyl CoA thiolase FadA.
  
 
 0.967
RN08_3932
acetyl-CoA acetyltransferase FadA.
  
 
 0.967
RN08_3927
CoA-transferase subunit alpha.
  
 0.966
RN08_0956
Fatty oxidation protein FadB.
  
 0.965
RN08_0275
acetyl-CoA acetyltransferase FadA.
  
 
 0.962
RN08_1018
Lipid carrier protein or keto acyl-CoA thiolase.
  
 
 0.962
RN08_3898
Lipid carrier protein.
  
 
 0.962
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.