STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2894AP-4-A phosphorylase. (195 aa)    
Predicted Functional Partners:
RN08_2892
Phosphatidylinositol mannoside acyltransferase.
 
  
 0.957
RN08_2893
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
 
  
 0.946
RN08_2891
Alpha-(1-2)-phosphatidylinositol mannosyltransferase.
  
  
 0.926
RN08_2895
threonine--tRNA ligase.
     
 0.921
RN08_1439
Bifunctional sulfate adenyltransferase subunit 1 CysN/adenylylsulfate kinase CysC.
    
  0.903
RN08_1438
Sulfate adenylyltransferase subunit 2.
    
  0.901
RN08_2890
Membrane protein.
       0.870
RN08_1556
DNA-directed RNA polymerase subunit omega.
 
 
  0.753
RN08_0745
DNA-directed RNA polymerase subunit beta'.
   
 0.701
RN08_3818
DNA-directed RNA polymerase subunit alpha.
    
  0.664
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.