STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_2986Inositol-1-monophosphatase SuhB. (271 aa)    
Predicted Functional Partners:
RN08_0055
Inositol-3-phosphate synthase.
  
 
 0.992
RN08_1777
Inositol-monophosphatase ImpA.
  
  
0.931
RN08_1950
Membrane-associated phospholipase A.
     
  0.900
RN08_2604
Phospholipase C.
     
  0.900
RN08_2605
Membrane-associated phospholipase B; Overlaps another CDS with the same product name.
     
  0.900
RN08_2607
Membrane-associated phospholipase A; Overlaps another CDS with the same product name.
     
  0.900
RN08_2362
3'-phosphoadenosine 5'-phosphate phosphatase.
 
  
 0.713
RN08_3322
6-phosphofructokinase.
   
 
 0.693
RN08_1774
Imidazole glycerol-phosphate dehydratase.
  
 
 0.678
RN08_0132
D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase.
 
 
 0.635
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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