STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3131Translation initiation factor IF-2. (900 aa)    
Predicted Functional Partners:
RN08_3184
30S ribosomal protein S2.
 
 0.997
RN08_0762
30S ribosomal protein S7.
  
 0.996
RN08_0787
30S ribosomal protein S3.
   
 0.996
RN08_0801
30S ribosomal protein S5.
  
 0.996
RN08_0782
50S ribosomal protein L4.
 
 0.995
RN08_0785
30S ribosomal protein S19.
   
 0.995
RN08_3130
Ribosome-binding factor RbfA.
  
  
 0.995
RN08_3819
30S ribosomal protein S4.
 
 0.995
RN08_0784
50S ribosomal protein L2.
  
 0.994
RN08_3820
30S ribosomal protein S11.
 
 0.994
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.