Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RN08_3142Magnesium chelatase; Overlaps another CDS with the same product name. (83 aa)    
Predicted Functional Partners:
RN08_3141
Magnesium chelatase; Overlaps another CDS with the same product name.
 0.999
RN08_2285
Cobalamin biosynthesis protein CobN.
 
 0.977
RN08_3139
Cobyrinic acid A,C-diamide synthase.
    
 0.879
RN08_3143
GCN5-like N-acetyltransferase.
     
 0.870
RN08_3140
cob(I)alamin adenosyltransferase.
 
   
 0.859
RN08_2961
Protoporphyrinogen oxidase; Overlaps another CDS with the same product name.
  
 
 0.764
RN08_2962
Protoporphyrinogen oxidase; Overlaps another CDS with the same product name.
  
 
 0.764
RN08_0583
Methyltransferase.
  
 0.702
RN08_1064
Magnesium chelatase.
  
 0.694
RN08_1660
Membrane protein.
  
 0.694
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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