STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3154Glutamine synthetase. (126 aa)    
Predicted Functional Partners:
RN08_3155
Glutamine synthetase.
     0.985
RN08_4263
Glutamate synthase large subunit.
  
 
 0.952
RN08_3151
Short-chain type dehydrogenase/reductase.
 
 
 0.847
RN08_3153
Glutamine amidotransferase.
 
  
 0.785
RN08_3747
GMP synthase.
    
 0.772
RN08_1882
CTP synthase.
  
 0.760
RN08_3324
glutamyl-tRNA(GLN) amidotransferase subunit C.
   
 0.722
RN08_2084
Glutamine synthetase GlnA.
  
   
 0.704
RN08_1775
Imidazole glycerol phosphate synthase subunit HisH.
  
 
 0.701
RN08_4262
Glutamate synthase small subunit.
  
 
 0.698
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.