STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3429Phosphatase. (222 aa)    
Predicted Functional Partners:
RN08_3430
Hypothetical protein.
 
 
  0.963
RN08_3426
Pterin-4-alpha-carbinolamine dehydratase.
 
  
 0.896
RN08_3428
Molybdenum cofactor biosynthesis protein MoaD.
  
    0.889
RN08_3427
Cyclic pyranopterin monophosphate synthase accessory protein.
  
    0.876
RN08_0965
Molybdenum cofactor biosynthesis protein MoaA.
  
    0.769
RN08_1521
Transcriptional regulator.
   
    0.613
RN08_2537
Hypothetical protein.
 
 
  0.593
RN08_3764
Inosine-5'-monophosphate dehydrogenase.
  
 
  0.585
RN08_1778
Imidazole glycerol phosphate synthase subunit HisF.
  
 
 0.555
RN08_2845
Hypothetical protein.
    
  0.553
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.