STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3574Integral membrane protein. (244 aa)    
Predicted Functional Partners:
RN08_3584
Adenosylhomocysteinase.
    
  0.830
RN08_2354
Methionine synthase.
    
  0.807
RN08_0911
Thiosulfate sulfurtransferase.
    
  0.806
RN08_2536
Thiosulfate sulfurtransferase SseB.
    
  0.806
RN08_2724
Homocysteine S-methyltransferase MmuM.
    
  0.806
RN08_3622
Thiosulfate sulfurtransferase SseA.
    
  0.806
RN08_0088
Aminotransferase.
     
  0.800
RN08_0438
O-succinylhomoserine sulfhydrylase.
     
  0.800
RN08_1210
Cystathionine gamma-synthase.
     
  0.800
RN08_1272
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
     
  0.800
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.