Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_3593Phosphomannomutase PmmA. (465 aa)    
Predicted Functional Partners:
RN08_3591
Mannose-6-phosphate isomerase.
  
 
 0.999
RN08_3600
D-alpha-D-mannose-1-phosphate guanylyltransferase ManB.
 
 
 0.994
RN08_3592
Hypothetical protein.
  
 
 0.974
RN08_3650
Phosphomannomutase PmmB; Overlaps another CDS with the same product name.
     
 0.958
RN08_1109
UTP--glucose-1-phosphate uridylyltransferase.
  
 0.952
RN08_1487
Glycogen phosphorylase.
 
 
 0.939
RN08_1356
Glucose-1-phosphate adenylyltransferase.
  
 
 0.892
RN08_0692
Hypothetical protein.
    
 0.870
RN08_3379
Phosphoglucomutase PgmA.
  
 0.818
RN08_1355
Capsular glucan synthase.
  
 
 0.752
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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