Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_3597Coenzyme F420:L-glutamate ligase. (448 aa)    
Predicted Functional Partners:
RN08_3596
2-phospho-L-lactate transferase.
 
 
 0.999
RN08_3292
2-phospho-L-lactate guanylyltransferase.
 
   
 0.927
RN08_0458
F420-dependent glucose-6-phosphate dehydrogenase.
 
 
 0.914
RN08_3923
Deazaflavin-dependent nitroreductase.
 
  
 0.912
RN08_1318
FO synthase.
 
   
 0.889
RN08_0152
F420-dependent glucose-6-phosphate dehydrogenase.
 
 
 0.859
RN08_3895
Coenzyme F420-dependent oxidoreductase.
 
 
 0.848
RN08_3407
Oxidoreductase.
 
 
 0.831
RN08_3188
Oxidoreductase.
 
 
 0.828
RN08_3253
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
 
 
 0.819
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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