STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3803Phosphoglucosamine mutase. (448 aa)    
Predicted Functional Partners:
RN08_1137
Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase.
 
 
 0.998
RN08_3798
Glucosamine--fructose-6-phosphate aminotransferase.
 
 
 0.998
RN08_3678
N-acetylglucosamine-6-phosphate deacetylase NagA.
    
 0.995
RN08_3322
6-phosphofructokinase.
  
 
 0.849
RN08_1351
Glucosyl-3-phosphoglycerate synthase.
  
 0.828
RN08_2361
cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase.
 
   
 0.817
RN08_3801
Alanine/proline-rich protein.
       0.810
RN08_3802
Hypothetical protein.
       0.810
RN08_1556
DNA-directed RNA polymerase subunit omega.
  
  
 0.799
RN08_0132
D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase.
  
 
 0.771
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.