STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3814Cutinase. (226 aa)    
Predicted Functional Partners:
RN08_4196
Membrane protein.
  
   
 0.716
RN08_3813
Cutinase.
 
    
0.697
RN08_1422
Lipoprotein LprA.
  
   
 0.569
RN08_0325
ESX-3 secretion system protein EccB3.
  
     0.532
RN08_0332
ESX-3 secretion system protein EccD.
  
     0.531
RN08_1765
Hypothetical protein.
  
     0.526
RN08_1566
Lipase.
      
 0.520
RN08_3812
ESX-4 secretion system protein EccB4.
       0.474
RN08_2469
Carboxylesterase B.
  
   
 0.469
RN08_0324
ESX-3 secretion system protein EccA.
  
     0.445
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.