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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3949Hypothetical protein. (176 aa)    
Predicted Functional Partners:
RN08_3948
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
       0.845
RN08_3946
4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10), 2-diene-4-oate hydrolase.
       0.713
RN08_3945
Extradiol dioxygenase.
       0.642
RN08_3944
Flavin-dependent monooxygenase reductase subunit HsaB.
       0.579
RN08_3947
Flavin-dependent monooxygenase oxygenase subunit HsaA.
       0.578
RN08_3902
Hypothetical protein.
      
 0.414
RN08_3068
Alanine-rich oxidoreductase.
      
 0.410
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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