STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_3964DNA integrity scanning protein DisA. (286 aa)    
Predicted Functional Partners:
RN08_3965
DNA integrity scanning protein DisA.
     0.990
RN08_3963
DNA repair protein RadA.
  
  
 0.957
RN08_2633
Hypothetical protein.
  
     0.713
RN08_3129
Bifunctional oligoribonuclease/PAP phosphatase NrnA.
  
   
 0.594
RN08_3960
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
  
    0.581
RN08_4096
Hypothetical protein.
  
    0.565
RN08_3532
ATP-dependent DNA helicase; Overlaps another CDS with the same product name.
   
    0.553
RN08_3962
Lipoprotein LpqE.
     
 0.551
RN08_3531
ATP-dependent DNA helicase; Overlaps another CDS with the same product name.
   
    0.512
RN08_0679
Transposase.
   
    0.504
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.