STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_4192propionyl-CoA carboxylase subunit beta AccD; Overlaps another CDS with the same product name. (444 aa)    
Predicted Functional Partners:
RN08_4194
Polyketide synthase; Overlaps another CDS with the same product name.
  
 
 0.965
RN08_4195
long-chain-fatty-acid--AMP ligase FadD32.
  
 
 0.959
RN08_4191
propionyl-CoA carboxylase subunit beta AccD; Overlaps another CDS with the same product name.
     0.956
RN08_3624
Bifunctional protein acetyl-/propionyl-CoA carboxylase subunit alpha AccA.
 
 0.952
RN08_1006
acetyl-CoAcarboxylase carboxyl transferase subunit beta.
  
 
 0.943
RN08_2772
acetyl-/propionyl-CoA carboxylase subunit alpha.
 
 0.903
RN08_1083
acetyl-/propionyl-CoA carboxylase subunit alpha.
 
 0.899
RN08_1481
Hypothetical protein.
 
 
 0.886
RN08_2798
Fatty acid synthase.
  
 
 0.879
RN08_2799
Fatty acid synthase.
  
 
 0.879
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.