STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_4209Hypothetical protein. (269 aa)    
Predicted Functional Partners:
RN08_4212
Acyltransferase.
       0.823
RN08_1576
Bifunctional riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase.
    
 0.808
RN08_3720
Trehalose 6-phosphate phosphatase.
 
 
 0.745
RN08_4211
Acyltransferase.
 
     0.733
RN08_4210
Acyltransferase.
       0.729
RN08_1583
6,7-dimethyl-8-ribityllumazine synthase.
    
 0.718
RN08_1053
Glucose-6-phosphate isomerase.
  
 
 0.701
RN08_3600
D-alpha-D-mannose-1-phosphate guanylyltransferase ManB.
 
 
 0.695
RN08_3591
Mannose-6-phosphate isomerase.
  
 
 0.663
RN08_0132
D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase.
  
 
 0.657
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.