Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RN08_4263Glutamate synthase large subunit. (1528 aa)    
Predicted Functional Partners:
RN08_0984
ferredoxin/ferredoxin--NADP reductase.
  
 0.999
RN08_1320
NADPH dependent 2,4-dienoyl-CoA reductase FadH.
  
 0.999
RN08_3422
NADPH-ferredoxin reductase FprA.
  
 0.999
RN08_4262
Glutamate synthase small subunit.
 0.999
RN08_1548
Carbamoyl-phosphate synthase large subunit.
  
 
 0.998
RN08_2466
Glutamine synthetase.
  
 
 0.996
RN08_2468
Glutamine synthetase.
  
 
 0.996
RN08_2744
NAD-dependent glutamate dehydrogenase.
     
 0.996
RN08_1547
Carbamoyl-phosphate synthase small subunit.
    
 0.995
RN08_2084
Glutamine synthetase GlnA.
  
 
 0.995
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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