STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_4289PE family protein PE36. (77 aa)    
Predicted Functional Partners:
RN08_4288
PPE family protein PPE69.
     
 0.789
RN08_1870
3-methyladenine DNA glycosylase.
      
 0.520
RN08_4287
ESAT-6 like protein EsxD.
       0.506
RN08_4291
ESX-2 secretion system protein EccB.
     
 0.503
RN08_4290
ESX-2 type VII secretion system protein EccC.
     
 0.500
RN08_3915
PPE family protein PPE63.
      
 0.497
RN08_1597
PE family protein PE16.
      
 0.493
RN08_0183
PE family protein PE4.
      
 0.414
RN08_2001
PPE family protein PPE28.
      
 0.412
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.