close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_4318Chromosome partitioning protein ParA. (347 aa)    
Predicted Functional Partners:
RN08_4317
Chromosome partitioning protein ParB.
 
 
 0.997
RN08_4319
rRNA small subunit methyltransferase G.
  
  
 0.969
RN08_4320
Hypothetical protein.
       0.753
RN08_0001
Chromosomal replication initiator protein DnaA.
 
 
 0.752
RN08_4321
Membrane protein insertase YidC.
     
 0.720
RN08_1353
DNA-3-methyladenine glycosylase I TagA.
      
 0.712
RN08_2933
Hypothetical protein.
  
 
 0.708
RN08_3191
Hypothetical protein.
  
  
 0.641
RN08_3034
DNA translocase FtsK.
  
  
 0.627
RN08_2385
Cell division protein FtsZ.
  
  
 0.576
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.