Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN08_4319rRNA small subunit methyltransferase G. (224 aa)    
Predicted Functional Partners:
RN08_4318
Chromosome partitioning protein ParA.
  
  
 0.970
RN08_4317
Chromosome partitioning protein ParB.
  
  
 0.954
RN08_4320
Hypothetical protein.
  
  
 0.916
RN08_4321
Membrane protein insertase YidC.
  
  
 0.784
RN08_0005
DNA gyrase subunit B.
  
  
 0.726
RN08_1877
16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA.
  
   
 0.712
RN08_2263
Pyrazinamidase/nicotinamidase PncA.
     
 0.672
RN08_2933
Hypothetical protein.
  
  
 0.669
RN08_0744
DNA-directed RNA polymerase subunit beta.
      
 0.663
RN08_0761
30S ribosomal protein S12.
      
 0.663
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.