STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuA_8Ferric hydroxamate uptake. (705 aa)    
Predicted Functional Partners:
iorA
Isoquinoline 1-oxidoreductase subunit alpha.
   
    0.961
mhbM
3-hydroxybenzoate 6-hydroxylase.
   
  
 0.896
CUJ65980.1
6-hydroxynicotinate 3-monooxygenase precursor.
   
  
 0.896
CUJ47011.1
Argininosuccinate lyase.
  
    0.888
amiC_3
Aliphatic amidase expression-regulating protein.
   
    0.846
livJ_3
Leu/Ile/Val/Thr-binding protein precursor.
   
    0.846
CUJ03305.1
Transport protein TonB.
  
 0.614
CUJ74596.1
TonB family C-terminal domain.
  
 0.607
fecA_2
Iron(III) dicitrate transport protein FecA.
  
 0.596
btuB
Outer membrane cobalamin translocator.
  
  
 0.585
Your Current Organism:
Achromobacter sp. ATCC31444
NCBI taxonomy Id: 1806484
Other names: A. sp. ATCC31444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.