Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aroC | folP | ERS370013_05334 | ERS370013_05719 | Chorismate synthase. | Dihydropteroate synthase. | 0.493 |
aroC | ilvE_3 | ERS370013_05334 | ERS370013_05865 | Chorismate synthase. | Probable branched-chain-amino-acid aminotransferase. | 0.436 |
aroC | pabB | ERS370013_05334 | ERS370013_05864 | Chorismate synthase. | Para-aminobenzoate synthase component 1. | 0.956 |
aroC | pheA | ERS370013_05334 | ERS370013_02866 | Chorismate synthase. | P-protein. | 0.990 |
aroC | trpA | ERS370013_05334 | ERS370013_03045 | Chorismate synthase. | Tryptophan synthase alpha chain. | 0.918 |
aroC | trpB | ERS370013_05334 | ERS370013_03046 | Chorismate synthase. | Tryptophan synthase beta chain. | 0.807 |
aroC | trpC | ERS370013_05334 | ERS370013_00909 | Chorismate synthase. | Indole-3-glycerol phosphate synthase. | 0.810 |
aroC | trpD2 | ERS370013_05334 | ERS370013_00910 | Chorismate synthase. | Anthranilate phosphoribosyltransferase 2. | 0.895 |
aroC | trpF | ERS370013_05334 | ERS370013_01844 | Chorismate synthase. | N-(5'-phosphoribosyl)anthranilate isomerase. | 0.752 |
aroC | trpG | ERS370013_05334 | ERS370013_00911 | Chorismate synthase. | Anthranilate synthase component II. | 0.987 |
folP | aroC | ERS370013_05719 | ERS370013_05334 | Dihydropteroate synthase. | Chorismate synthase. | 0.493 |
folP | ilvE_3 | ERS370013_05719 | ERS370013_05865 | Dihydropteroate synthase. | Probable branched-chain-amino-acid aminotransferase. | 0.935 |
folP | pabB | ERS370013_05719 | ERS370013_05864 | Dihydropteroate synthase. | Para-aminobenzoate synthase component 1. | 0.879 |
folP | trpG | ERS370013_05719 | ERS370013_00911 | Dihydropteroate synthase. | Anthranilate synthase component II. | 0.748 |
ilvE_3 | aroC | ERS370013_05865 | ERS370013_05334 | Probable branched-chain-amino-acid aminotransferase. | Chorismate synthase. | 0.436 |
ilvE_3 | folP | ERS370013_05865 | ERS370013_05719 | Probable branched-chain-amino-acid aminotransferase. | Dihydropteroate synthase. | 0.935 |
ilvE_3 | pabB | ERS370013_05865 | ERS370013_05864 | Probable branched-chain-amino-acid aminotransferase. | Para-aminobenzoate synthase component 1. | 0.998 |
ilvE_3 | pheA | ERS370013_05865 | ERS370013_02866 | Probable branched-chain-amino-acid aminotransferase. | P-protein. | 0.784 |
ilvE_3 | trpD2 | ERS370013_05865 | ERS370013_00910 | Probable branched-chain-amino-acid aminotransferase. | Anthranilate phosphoribosyltransferase 2. | 0.626 |
ilvE_3 | trpG | ERS370013_05865 | ERS370013_00911 | Probable branched-chain-amino-acid aminotransferase. | Anthranilate synthase component II. | 0.675 |
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