STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001639725_02271Unannotated protein. (508 aa)    
Predicted Functional Partners:
GCA_001639725_02273
Unannotated protein.
 0.999
GCA_001639725_02846
Unannotated protein.
   
 0.979
GCA_001639725_02251
Unannotated protein.
 
  
 0.934
GCA_001639725_02793
Unannotated protein.
 
 
 0.929
GCA_001639725_01837
Unannotated protein.
  
 
 0.919
GCA_001639725_00087
Unannotated protein.
  
 
 0.918
GCA_001639725_00810
Unannotated protein.
    
 0.916
GCA_001639725_00514
Unannotated protein.
    
 0.910
GCA_001639725_02217
Unannotated protein.
  
 0.907
GCA_001639725_00809
Unannotated protein.
    
 0.888
Your Current Organism:
Marinomonas atlantica
NCBI taxonomy Id: 1806668
Other names: CECT 9050, LMG 29244, LMG:29244, M. atlantica, Marinomonas atlantica Lasa et al. 2016, Marinomonas sp. Cmf 18.22, strain Cmf 18.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.