STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001597725_03103Unannotated protein. (497 aa)    
Predicted Functional Partners:
GCA_001597725_00749
Unannotated protein.
   
 0.923
GCA_001597725_00576
Unannotated protein.
   
 
 0.921
GCA_001597725_01473
Unannotated protein.
     
 0.901
GCA_001597725_01250
Unannotated protein.
    
 0.898
GCA_001597725_00313
Unannotated protein.
    
 0.887
GCA_001597725_01465
Unannotated protein.
     
 0.884
GCA_001597725_03102
Unannotated protein.
  
  
 0.862
GCA_001597725_00142
Unannotated protein.
   
  0.843
GCA_001597725_03193
Unannotated protein.
    
  0.794
GCA_001597725_00242
Unannotated protein.
    
 0.652
Your Current Organism:
Neptuniibacter marinus
NCBI taxonomy Id: 1806670
Other names: CECT 8938, DSM 100783, N. marinus, Neptuniibacter marinus Dieguez et al. 2017, Neptuniibacter sp. ATR 1.1, Neptuniibacter sp. ATR 1.2, Neptuniibacter sp. ATR 1.5, Neptuniibacter sp. BFR 2.2, Neptuniibacter sp. BFR 3.3, Neptuniibacter sp. CECT 8938, Neptuniibacter sp. CECT 8939, strain ATR 1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.