STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_000518Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
Saspl_023886
CBFD_NFYB_HMF domain-containing protein.
  
 0.912
Saspl_039753
CBFD_NFYB_HMF domain-containing protein.
  
 0.910
Saspl_007511
CBFD_NFYB_HMF domain-containing protein.
  
 0.904
Saspl_001198
CBFD_NFYB_HMF domain-containing protein.
  
 0.902
Saspl_039640
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.884
Saspl_031369
CBFD_NFYB_HMF domain-containing protein.
   
 0.881
Saspl_021198
CBFD_NFYB_HMF domain-containing protein.
  
 0.798
Saspl_005843
CBFD_NFYB_HMF domain-containing protein.
    
 0.790
Saspl_049000
CBFD_NFYB_HMF domain-containing protein.
    
 0.790
Saspl_050888
CBFD_NFYB_HMF domain-containing protein.
    
 0.790
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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