STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_054007Hydrophob_seed domain-containing protein. (123 aa)    
Predicted Functional Partners:
Saspl_042415
Stress-response A/B barrel domain-containing protein.
    
 0.868
Saspl_035958
Uncharacterized protein.
    
 0.868
Saspl_034878
Uncharacterized protein.
    
  0.788
Saspl_008657
DUF1421 domain-containing protein.
    
 0.735
Saspl_007611
DUF1421 domain-containing protein.
    
 0.735
Saspl_045931
Uncharacterized protein.
    
 0.731
Saspl_046720
Uncharacterized protein.
    
 0.731
Saspl_017420
AAI domain-containing protein.
  
   
 0.704
Saspl_017445
AAI domain-containing protein.
  
   
 0.704
Saspl_035269
Uncharacterized protein.
  
   
 0.700
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.