Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IMP4-2 | KRR1 | A0A4D9B2R3 | A0A4D9B653 | U3 small nucleolar ribonucleoprotein IMP4. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
IMP4-2 | MAK11-3 | A0A4D9B2R3 | A0A4D8Y531 | U3 small nucleolar ribonucleoprotein IMP4. | Protein MAK11. | 0.922 |
IMP4-2 | RP-L24e-3 | A0A4D9B2R3 | A0A4D8YK00 | U3 small nucleolar ribonucleoprotein IMP4. | Large subunit ribosomal protein L24e. | 0.945 |
IMP4-2 | RP-L24e-4 | A0A4D9B2R3 | A0A4D8YWD5 | U3 small nucleolar ribonucleoprotein IMP4. | Large subunit ribosomal protein L24e. | 0.945 |
IMP4-2 | RP-L24e-5 | A0A4D9B2R3 | A0A4D8Z3H7 | U3 small nucleolar ribonucleoprotein IMP4. | Large subunit ribosomal protein L24e. | 0.945 |
IMP4-2 | RPF2 | A0A4D9B2R3 | A0A4D8YVN8 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome production factor 2. | 0.973 |
IMP4-2 | RPF2-2 | A0A4D9B2R3 | A0A4D9AZ35 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome production factor 2. | 0.973 |
IMP4-2 | RPF2-3 | A0A4D9B2R3 | A0A4D9C7F1 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome production factor 2. | 0.973 |
IMP4-2 | Saspl_046382 | A0A4D9B2R3 | A0A4D8YA16 | U3 small nucleolar ribonucleoprotein IMP4. | Uncharacterized protein. | 0.912 |
IMP4-2 | Saspl_051977 | A0A4D9B2R3 | A0A4D8Y8M7 | U3 small nucleolar ribonucleoprotein IMP4. | Uncharacterized protein. | 0.912 |
KRR1 | IMP4-2 | A0A4D9B653 | A0A4D9B2R3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 small nucleolar ribonucleoprotein IMP4. | 0.999 |
KRR1 | MAK11-3 | A0A4D9B653 | A0A4D8Y531 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Protein MAK11. | 0.884 |
KRR1 | RP-L24e-3 | A0A4D9B653 | A0A4D8YK00 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Large subunit ribosomal protein L24e. | 0.913 |
KRR1 | RP-L24e-4 | A0A4D9B653 | A0A4D8YWD5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Large subunit ribosomal protein L24e. | 0.913 |
KRR1 | RP-L24e-5 | A0A4D9B653 | A0A4D8Z3H7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Large subunit ribosomal protein L24e. | 0.913 |
KRR1 | RPF2 | A0A4D9B653 | A0A4D8YVN8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosome production factor 2. | 0.988 |
KRR1 | RPF2-2 | A0A4D9B653 | A0A4D9AZ35 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosome production factor 2. | 0.988 |
KRR1 | RPF2-3 | A0A4D9B653 | A0A4D9C7F1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Ribosome production factor 2. | 0.988 |
KRR1 | Saspl_046382 | A0A4D9B653 | A0A4D8YA16 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.999 |
KRR1 | Saspl_051977 | A0A4D9B653 | A0A4D8Y8M7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.999 |
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