STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_041573Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (184 aa)    
Predicted Functional Partners:
rbcL
Ribulose-bisphosphate carboxylase large chain.
  
 
 0.992
Saspl_047308
Uncharacterized protein.
  
 
 0.992
Saspl_018005
Uncharacterized protein.
  
 
 0.992
Saspl_049646
CoA carboxyltransferase N-terminal domain-containing protein.
  
 
 0.991
PGK
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.896
Saspl_031411
Uncharacterized protein.
     
 0.896
PGK-2
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.883
PGK-4
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.883
PGP
Phosphoglycolate phosphatase.
   
 
 0.869
PGP-2
Phosphoglycolate phosphatase.
   
 
 0.869
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.