STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARR-B-3Two-component response regulator ARR-B family. (475 aa)    
Predicted Functional Partners:
AHP-11
SAGA-associated factor 11.
    
 0.635
AHP-14
Histidine-containing phosphotransfer peotein.
    
 0.635
AHP-19
Histidine-containing phosphotransfer peotein.
    
 0.635
USP30
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.529
SUV39H-4
Histone-lysine N-methyltransferase SUV39H.
    
  0.487
SUV39H-6
Histone-lysine N-methyltransferase SUV39H.
    
  0.487
AHP-2
Histidine-containing phosphotransfer peotein.
    
 0.481
AHP-3
Histidine-containing phosphotransfer peotein.
    
 0.481
AHP-5
Histidine-containing phosphotransfer peotein.
    
 0.481
AHP-12
Histidine-containing phosphotransfer peotein.
    
 0.481
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.