STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_032161GRAM domain-containing protein. (243 aa)    
Predicted Functional Partners:
APTX
Aprataxin.
  
     0.532
APTX-4
Aprataxin.
  
     0.529
Saspl_028391
Uncharacterized protein.
  
     0.489
Saspl_036685
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
  
     0.488
Saspl_015979
LOB domain-containing protein.
  
     0.486
Saspl_024472
LOB domain-containing protein.
  
     0.485
Saspl_036870
X8 domain-containing protein.
  
     0.479
Saspl_029261
X8 domain-containing protein.
  
     0.476
Saspl_033479
X8 domain-containing protein.
  
     0.475
Saspl_012188
Uncharacterized protein.
  
     0.475
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.