STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_042000Uncharacterized protein. (554 aa)    
Predicted Functional Partners:
guaA
GMP synthase (Glutamine-hydrolysing).
  
 0.813
guaA-2
GMP synthase (Glutamine-hydrolysing).
  
 0.813
Saspl_017338
DAHP_synth_1 domain-containing protein.
  
 
 0.785
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 
 0.782
purH-2
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 
 0.782
Saspl_042105
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.780
Saspl_040913
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.780
Saspl_034757
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.780
ATPeV1F
V-type H+-transporting ATPase subunit F.
    
 0.730
surE
5'-nucleotidase.
    
 0.683
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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